@hackage varan0.5

Process mpileup output to identify significant differences

  • Categories

  • License

    LicenseRef-GPL

  • Maintainer

    Ketil Malde <ketil@malde.org>

  • Versions

    • 0.5.1 Mon, 1 Dec 2014
    • 0.5 Wed, 26 Nov 2014
    • 0.3 Mon, 14 Jul 2014

Using Agresti-Coull estimation of confidence interval, report variant positions found in pooled samples along with significance of the variant having different underlying allele frequency (+ for 95%, * for 99%).