@hackage BiobaseFR3D0.1.3.0

Importer for FR3D resources

Categories
- Bioinformatics
License
GPL-3.0-only
Maintainer
choener@tbi.univie.ac.at
Links
- Homepage
- Documentation
- No source repository
Versions
- 0.2.3.0 Thu, 16 Feb 2012
- 0.2.2.0 Tue, 18 Oct 2011
- 0.1.3.0 Tue, 4 Oct 2011
- 0.1.1.0 Wed, 28 Sep 2011
- 0.1.0.1 Mon, 22 Aug 2011

Provides importers for FR3D resource files. Of particular interest are basepairs files which describe canonical and non-canonical (non-Watson-Crick) base pairings in RNA secondary structure.

The original FR3D paper is:

FR3D: Finding Local and Composite Recurrent Structural Motifs in RNA 3D Structures, Michael Sarver; Craig L. Zirbel; Jesse Stombaugh; Ali Mokdad; Neocles B. Leontis. /Journal of Mathematical Biology/ (2008) 56:215–252.

Installation
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@hackage BiobaseFR3D0.1.3.0

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